Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vcam1P29533 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Gm23612-201ENSMUST00000103823 110 ntBASIC13□□□□□ -0.33
Vcam1P29533 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13□□□□□ -0.33
Vcam1P29533 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13□□□□□ -0.33
Vcam1P29533 Gm15196-201ENSMUST00000121406 482 ntBASIC13□□□□□ -0.33
Vcam1P29533 Gm15620-201ENSMUST00000122949 270 ntBASIC13□□□□□ -0.33
Vcam1P29533 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Gm23576-201ENSMUST00000179918 110 ntBASIC13□□□□□ -0.33
Vcam1P29533 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13□□□□□ -0.33
Vcam1P29533 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13□□□□□ -0.33
Vcam1P29533 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vcam1P29533 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.99□□□□□ -0.33
Vcam1P29533 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm11979-201ENSMUST00000119629 743 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm9372-201ENSMUST00000168454 430 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Mir6941-201ENSMUST00000184711 59 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Gm5621-201ENSMUST00000187303 640 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm4903-201ENSMUST00000210462 405 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Vcam1P29533 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.99□□□□□ -0.33
Vcam1P29533 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.99□□□□□ -0.33
Vcam1P29533 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vcam1P29533 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vcam1P29533 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.99□□□□□ -0.33
Vcam1P29533 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms