Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.93□□□□□ -0.66
BdnfP21237 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Gm45289-201ENSMUST00000211048 2577 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.93□□□□□ -0.66
BdnfP21237 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
BdnfP21237 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.93□□□□□ -0.66
BdnfP21237 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.93□□□□□ -0.66
BdnfP21237 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.93□□□□□ -0.66
BdnfP21237 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
BdnfP21237 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
BdnfP21237 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
BdnfP21237 Gm28937-201ENSMUST00000185413 695 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm29400-201ENSMUST00000187208 695 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm28662-201ENSMUST00000188446 695 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm28251-201ENSMUST00000188835 695 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Gm37318-201ENSMUST00000194325 695 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm38017-201ENSMUST00000194768 695 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm37287-201ENSMUST00000195449 695 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm37793-201ENSMUST00000195548 695 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm17812-201ENSMUST00000204935 318 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Gm45331-201ENSMUST00000209868 554 ntBASIC10.93□□□□□ -0.66
BdnfP21237 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.93□□□□□ -0.66
BdnfP21237 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
BdnfP21237 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
BdnfP21237 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
BdnfP21237 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
BdnfP21237 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.93□□□□□ -0.66
BdnfP21237 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
BdnfP21237 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
BdnfP21237 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.93□□□□□ -0.66
BdnfP21237 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
BdnfP21237 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
BdnfP21237 Gm14071-201ENSMUST00000117817 509 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.92□□□□□ -0.66
BdnfP21237 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Gm27320-201ENSMUST00000184892 109 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Gm5982-201ENSMUST00000196234 512 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Gm43966-201ENSMUST00000203301 612 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Gm44262-201ENSMUST00000204969 372 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Gm17827-201ENSMUST00000211825 742 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Gm6082-201ENSMUST00000215204 454 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Gm9797-202ENSMUST00000218003 294 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms