Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.14□□□□□ -0.95
Hoxd3P09027 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 AC173482.3-201ENSMUST00000225492 1212 ntBASIC9.14□□□□□ -0.95
Hoxd3P09027 AC151902.1-201ENSMUST00000227800 375 ntBASIC9.14□□□□□ -0.95
Hoxd3P09027 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.14□□□□□ -0.95
Hoxd3P09027 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Map1b-203ENSMUST00000223725 2669 ntBASIC9.14□□□□□ -0.95
Hoxd3P09027 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.14□□□□□ -0.95
Hoxd3P09027 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxd3P09027 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hoxd3P09027 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 AC132384.4-201ENSMUST00000220343 1397 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm13916-201ENSMUST00000117368 628 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm16149-201ENSMUST00000117631 309 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.13□□□□□ -0.95
Hoxd3P09027 V1rg10-201ENSMUST00000183378 937 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm5714-201ENSMUST00000197343 566 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 BB187690-201ENSMUST00000198619 1176 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 AC162934.3-201ENSMUST00000223015 841 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm26437-201ENSMUST00000082595 105 ntBASIC9.13□□□□□ -0.95
Hoxd3P09027 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Hoxd3P09027 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxd3P09027 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms