Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.56□□□□□ -0.88
Hoxa3P02831 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm8574-201ENSMUST00000203207 924 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm8342-201ENSMUST00000209839 757 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Hoxa3P02831 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Hoxa3P02831 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.56□□□□□ -0.88
Hoxa3P02831 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxa3P02831 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.55□□□□□ -0.88
Hoxa3P02831 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxa3P02831 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hoxa3P02831 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxa3P02831 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxa3P02831 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxa3P02831 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxa3P02831 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms