Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CopeO89079 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CopeO89079 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CopeO89079 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CopeO89079 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CopeO89079 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CopeO89079 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CopeO89079 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CopeO89079 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CopeO89079 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CopeO89079 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.68□□□□□ -0.54
CopeO89079 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.68□□□□□ -0.54
CopeO89079 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.68□□□□□ -0.54
CopeO89079 AY036118-201ENSMUST00000200021 923 ntBASIC11.68□□□□□ -0.54
CopeO89079 Gm45224-201ENSMUST00000208203 414 ntBASIC11.68□□□□□ -0.54
CopeO89079 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.68□□□□□ -0.54
CopeO89079 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Gm26448-201ENSMUST00000082446 203 ntBASIC11.68□□□□□ -0.54
CopeO89079 Gm10478-201ENSMUST00000084451 396 ntBASIC11.68□□□□□ -0.54
CopeO89079 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.68□□□□□ -0.54
CopeO89079 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.68□□□□□ -0.54
CopeO89079 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CopeO89079 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CopeO89079 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.67□□□□□ -0.54
CopeO89079 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CopeO89079 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.67□□□□□ -0.54
CopeO89079 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CopeO89079 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.67□□□□□ -0.54
CopeO89079 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CopeO89079 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
CopeO89079 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.67□□□□□ -0.54
CopeO89079 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.67□□□□□ -0.54
CopeO89079 Gm15276-201ENSMUST00000145953 498 ntBASIC11.67□□□□□ -0.54
CopeO89079 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CopeO89079 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Gm27516-201ENSMUST00000184237 98 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm29615-201ENSMUST00000185371 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm28224-201ENSMUST00000186078 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm29001-201ENSMUST00000186177 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm28292-201ENSMUST00000186593 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm28101-201ENSMUST00000187608 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm29076-201ENSMUST00000187689 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm28302-201ENSMUST00000187931 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm28646-201ENSMUST00000188220 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm28205-201ENSMUST00000189177 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm29032-201ENSMUST00000189797 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm28695-201ENSMUST00000190300 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm37448-201ENSMUST00000192795 697 ntBASIC11.67□□□□□ -0.54
CopeO89079 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.67□□□□□ -0.54
CopeO89079 Gm17812-201ENSMUST00000204935 318 ntBASIC11.67□□□□□ -0.54
CopeO89079 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.67□□□□□ -0.54
CopeO89079 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
CopeO89079 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.67□□□□□ -0.54
CopeO89079 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms