Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.9□□□□□ -0.66
Hcn1O88704 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.9□□□□□ -0.66
Hcn1O88704 Gm23251-201ENSMUST00000103773 110 ntBASIC10.9□□□□□ -0.66
Hcn1O88704 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
Hcn1O88704 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Hcn1O88704 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.9□□□□□ -0.66
Hcn1O88704 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Hcn1O88704 Gm9192-201ENSMUST00000183221 985 ntBASIC10.9□□□□□ -0.66
Hcn1O88704 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.9□□□□□ -0.66
Hcn1O88704 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.9□□□□□ -0.66
Hcn1O88704 Gm45575-201ENSMUST00000210283 548 ntBASIC10.9□□□□□ -0.66
Hcn1O88704 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.9□□□□□ -0.66
Hcn1O88704 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hcn1O88704 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Hcn1O88704 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hcn1O88704 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.9□□□□□ -0.67
Hcn1O88704 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Hcn1O88704 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Gm9062-201ENSMUST00000117712 727 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.89□□□□□ -0.67
Hcn1O88704 Gm15207-201ENSMUST00000119259 442 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Gm11331-201ENSMUST00000119764 288 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Gm13461-201ENSMUST00000120980 662 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Gm14441-201ENSMUST00000121960 540 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Gm23699-201ENSMUST00000158835 135 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Gm8815-201ENSMUST00000173809 620 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.89□□□□□ -0.67
Hcn1O88704 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Gm9555-201ENSMUST00000200908 583 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Gm1821-202ENSMUST00000227415 750 ntBASIC10.89□□□□□ -0.67
Hcn1O88704 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Hcn1O88704 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Hcn1O88704 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hcn1O88704 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Hcn1O88704 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hcn1O88704 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hcn1O88704 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Hcn1O88704 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms