Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gm11836-201ENSMUST00000121022 441 ntBASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gm7666-201ENSMUST00000146631 819 ntBASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gm6905-201ENSMUST00000205729 511 ntBASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna9G3X8Z7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chrna9G3X8Z7 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Chrna9G3X8Z7 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chrna9G3X8Z7 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.15□□□□□ -0.47
Chrna9G3X8Z7 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Rgr-203ENSMUST00000225070 4704 ntBASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm24992-201ENSMUST00000157412 130 ntBASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm24074-201ENSMUST00000158178 260 ntBASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm1821-202ENSMUST00000227415 750 ntBASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Ginm1-202ENSMUST00000065124 300 ntBASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chrna9G3X8Z7 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna9G3X8Z7 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna9G3X8Z7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.13□□□□□ -0.47
Chrna9G3X8Z7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna9G3X8Z7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna9G3X8Z7 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chrna9G3X8Z7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chrna9G3X8Z7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms