Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Gm15528-201ENSMUST00000117821 864 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Gm15136-201ENSMUST00000120552 533 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Mir7051-201ENSMUST00000184167 73 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Mir7035-201ENSMUST00000184713 82 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Gm29304-201ENSMUST00000186555 695 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Gm29223-201ENSMUST00000188867 695 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Gm37921-201ENSMUST00000194333 695 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Gm9369-201ENSMUST00000196009 733 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Gm43506-201ENSMUST00000200675 753 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
NpcdF8VQB8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.71□□□□□ -0.21
NpcdF8VQB8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NpcdF8VQB8 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NpcdF8VQB8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NpcdF8VQB8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NpcdF8VQB8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NpcdF8VQB8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NpcdF8VQB8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NpcdF8VQB8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NpcdF8VQB8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm15329-201ENSMUST00000121408 155 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm23694-201ENSMUST00000179335 110 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm42751-201ENSMUST00000198065 559 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm8234-201ENSMUST00000198523 1107 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 AC154759.1-201ENSMUST00000224137 1159 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm10580-201ENSMUST00000097985 396 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm10582-201ENSMUST00000097987 396 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 Gm10583-201ENSMUST00000097988 396 ntBASIC13.7□□□□□ -0.22
NpcdF8VQB8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms