Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm15198-201ENSMUST00000117283 177 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm11573-201ENSMUST00000119956 394 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm7150-201ENSMUST00000122032 981 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm4157-201ENSMUST00000211647 679 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pcdh1F7BJK1 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pcdh1F7BJK1 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms