Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm25394-201ENSMUST00000157338 133 ntBASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm43726-201ENSMUST00000199110 775 ntBASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm11473-201ENSMUST00000118980 359 ntBASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm13624-201ENSMUST00000120263 462 ntBASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm28032-201ENSMUST00000184104 96 ntBASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm8525-201ENSMUST00000189674 861 ntBASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm38007-201ENSMUST00000192187 313 ntBASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm30055-201ENSMUST00000203175 803 ntBASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col4a6B1AVK5 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Gm6755-201ENSMUST00000100598 864 ntBASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Gm6740-201ENSMUST00000100617 864 ntBASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Gm5244-201ENSMUST00000164001 339 ntBASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms