Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.55□□□□□ -0.4
Scn3aA2ASI5 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Gm45500-201ENSMUST00000211676 803 ntBASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Gm8181-201ENSMUST00000062242 669 ntBASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn3aA2ASI5 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.55□□□□□ -0.4
Scn3aA2ASI5 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gm24328-201ENSMUST00000175104 67 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gm5870-201ENSMUST00000196461 282 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gm25951-201ENSMUST00000175330 64 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gm18801-201ENSMUST00000186616 536 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gm37852-201ENSMUST00000193027 350 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.54□□□□□ -0.4
Scn3aA2ASI5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 148 ms