Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm4178-201ENSMUST00000218307 649 ntBASIC5.81□□□□□ -1.48
Ubr4A2AN08 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Gm43152-201ENSMUST00000202495 1638 ntBASIC5.81□□□□□ -1.48
Ubr4A2AN08 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Gm5174-201ENSMUST00000171131 1423 ntBASIC5.81□□□□□ -1.48
Ubr4A2AN08 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Gm18227-201ENSMUST00000211082 1468 ntBASIC5.81□□□□□ -1.48
Ubr4A2AN08 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ubr4A2AN08 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Spag8-201ENSMUST00000084646 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 AC242269.1-201ENSMUST00000227020 741 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm19001-201ENSMUST00000222736 1651 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm5910-201ENSMUST00000211819 1746 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm15604-201ENSMUST00000118350 1456 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm11929-201ENSMUST00000118175 945 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm11824-201ENSMUST00000120191 846 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm14967-201ENSMUST00000153483 335 ntTSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Ctdp1-203ENSMUST00000161003 1199 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm5459-201ENSMUST00000171235 798 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 AC165260.2-202ENSMUST00000224998 631 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 AC138667.1-201ENSMUST00000225472 316 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm44746-201ENSMUST00000205565 1349 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Nudt13-207ENSMUST00000224311 1574 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm10461-201ENSMUST00000202073 4786 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 n-R5s51-201ENSMUST00000104473 123 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm12361-201ENSMUST00000119806 1044 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm27483-201ENSMUST00000184983 71 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm29577-201ENSMUST00000186427 693 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 CT009546.3-201ENSMUST00000220914 208 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 AC130217.1-201ENSMUST00000224146 909 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm5739-201ENSMUST00000208601 1703 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm7609-202ENSMUST00000113407 853 ntTSL 2 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm12727-201ENSMUST00000119885 359 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm15610-201ENSMUST00000120584 195 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm2666-201ENSMUST00000160587 891 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm7393-201ENSMUST00000172650 739 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm6677-201ENSMUST00000195100 441 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Tubb3-202ENSMUST00000212743 776 ntTSL 3 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm3791-201ENSMUST00000220790 768 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm15433-201ENSMUST00000097671 891 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms