Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Gm7417-201ENSMUST00000192950 473 ntBASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb2S4R1M3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb2S4R1M3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb2S4R1M3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb2S4R1M3 Gm7143-201ENSMUST00000222811 859 ntBASIC20.35■□□□□ 0.85
H2afb2S4R1M3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb2S4R1M3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb2S4R1M3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb2S4R1M3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb2S4R1M3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb2S4R1M3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.33■□□□□ 0.85
H2afb2S4R1M3 Etf1-202ENSMUST00000180351 108 ntBASIC20.33■□□□□ 0.85
H2afb2S4R1M3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.33■□□□□ 0.85
H2afb2S4R1M3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2afb2S4R1M3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2afb2S4R1M3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
H2afb2S4R1M3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb2S4R1M3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb2S4R1M3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb2S4R1M3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb2S4R1M3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb2S4R1M3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
H2afb2S4R1M3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
H2afb2S4R1M3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb2S4R1M3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb2S4R1M3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb2S4R1M3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb2S4R1M3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb2S4R1M3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb2S4R1M3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.29■□□□□ 0.84
H2afb2S4R1M3 Gm9959-201ENSMUST00000068277 390 ntBASIC20.29■□□□□ 0.84
H2afb2S4R1M3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
H2afb2S4R1M3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb2S4R1M3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb2S4R1M3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.28■□□□□ 0.84
H2afb2S4R1M3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
H2afb2S4R1M3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb2S4R1M3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.28■□□□□ 0.84
H2afb2S4R1M3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.28■□□□□ 0.84
H2afb2S4R1M3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb2S4R1M3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
H2afb2S4R1M3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb2S4R1M3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb2S4R1M3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb2S4R1M3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb2S4R1M3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb2S4R1M3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H2afb2S4R1M3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.27■□□□□ 0.83
H2afb2S4R1M3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb2S4R1M3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms