Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb3S4R1G7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
H2afb3S4R1G7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
H2afb3S4R1G7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
H2afb3S4R1G7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Gm43566-201ENSMUST00000196851 808 ntBASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb3S4R1G7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
H2afb3S4R1G7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb3S4R1G7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb3S4R1G7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
H2afb3S4R1G7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb3S4R1G7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb3S4R1G7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb3S4R1G7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.17■□□□□ 0.5
H2afb3S4R1G7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb3S4R1G7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
H2afb3S4R1G7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb3S4R1G7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb3S4R1G7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb3S4R1G7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb3S4R1G7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb3S4R1G7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
H2afb3S4R1G7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
H2afb3S4R1G7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Gm10399-202ENSMUST00000202768 748 ntBASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
H2afb3S4R1G7 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Gm13238-201ENSMUST00000117655 780 ntBASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
H2afb3S4R1G7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb3S4R1G7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms