Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.55■□□□□ 0.88
Cldn3Q9Z0G9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn3Q9Z0G9 Gm9870-201ENSMUST00000063874 645 ntBASIC20.55■□□□□ 0.88
Cldn3Q9Z0G9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn3Q9Z0G9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn3Q9Z0G9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn3Q9Z0G9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn3Q9Z0G9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn3Q9Z0G9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn3Q9Z0G9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn3Q9Z0G9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn3Q9Z0G9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cldn3Q9Z0G9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn3Q9Z0G9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cldn3Q9Z0G9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn3Q9Z0G9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn3Q9Z0G9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.52■□□□□ 0.88
Cldn3Q9Z0G9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.52■□□□□ 0.88
Cldn3Q9Z0G9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn3Q9Z0G9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn3Q9Z0G9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn3Q9Z0G9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn3Q9Z0G9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Cldn3Q9Z0G9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn3Q9Z0G9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn3Q9Z0G9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn3Q9Z0G9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn3Q9Z0G9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn3Q9Z0G9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn3Q9Z0G9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn3Q9Z0G9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.5■□□□□ 0.87
Cldn3Q9Z0G9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn3Q9Z0G9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cldn3Q9Z0G9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn3Q9Z0G9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Cldn3Q9Z0G9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn3Q9Z0G9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn3Q9Z0G9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn3Q9Z0G9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.48■□□□□ 0.87
Cldn3Q9Z0G9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.48■□□□□ 0.87
Cldn3Q9Z0G9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn3Q9Z0G9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn3Q9Z0G9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn3Q9Z0G9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn3Q9Z0G9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cldn3Q9Z0G9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.45■□□□□ 0.86
Cldn3Q9Z0G9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Cldn3Q9Z0G9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn3Q9Z0G9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn3Q9Z0G9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn3Q9Z0G9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn3Q9Z0G9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn3Q9Z0G9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Cldn3Q9Z0G9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn3Q9Z0G9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cldn3Q9Z0G9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn3Q9Z0G9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn3Q9Z0G9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn3Q9Z0G9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms