Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Clcn5Q9WVD4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Gm42569-201ENSMUST00000200539 472 ntBASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn5Q9WVD4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Gm10493-201ENSMUST00000097270 612 ntBASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Clcn5Q9WVD4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Gm43173-201ENSMUST00000202246 593 ntBASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.03■□□□□ 0.96
Clcn5Q9WVD4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Clcn5Q9WVD4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.02■□□□□ 0.96
Clcn5Q9WVD4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.02■□□□□ 0.96
Clcn5Q9WVD4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn5Q9WVD4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Clcn5Q9WVD4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn5Q9WVD4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Clcn5Q9WVD4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn5Q9WVD4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Gm26571-201ENSMUST00000181399 666 ntBASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn5Q9WVD4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clcn5Q9WVD4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21■□□□□ 0.95
Clcn5Q9WVD4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clcn5Q9WVD4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn5Q9WVD4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn5Q9WVD4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn5Q9WVD4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn5Q9WVD4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn5Q9WVD4 Gm27011-201ENSMUST00000182352 972 ntBASIC20.98■□□□□ 0.95
Clcn5Q9WVD4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
Clcn5Q9WVD4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.98■□□□□ 0.95
Clcn5Q9WVD4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn5Q9WVD4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn5Q9WVD4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Clcn5Q9WVD4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Clcn5Q9WVD4 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.97■□□□□ 0.95
Clcn5Q9WVD4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn5Q9WVD4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.97■□□□□ 0.95
Clcn5Q9WVD4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn5Q9WVD4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clcn5Q9WVD4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn5Q9WVD4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn5Q9WVD4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn5Q9WVD4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn5Q9WVD4 Gm42642-201ENSMUST00000200683 355 ntBASIC20.96■□□□□ 0.95
Clcn5Q9WVD4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn5Q9WVD4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn5Q9WVD4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn5Q9WVD4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms