Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col13a1Q9R1N9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Gm26833-201ENSMUST00000180899 440 ntBASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Gm43060-201ENSMUST00000200621 289 ntBASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col13a1Q9R1N9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col13a1Q9R1N9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col13a1Q9R1N9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col13a1Q9R1N9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col13a1Q9R1N9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col13a1Q9R1N9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col13a1Q9R1N9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col13a1Q9R1N9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col13a1Q9R1N9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col13a1Q9R1N9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col13a1Q9R1N9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.2■□□□□ 0.34
Col13a1Q9R1N9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.2■□□□□ 0.34
Col13a1Q9R1N9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.2■□□□□ 0.34
Col13a1Q9R1N9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Col13a1Q9R1N9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col13a1Q9R1N9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col13a1Q9R1N9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Col13a1Q9R1N9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col13a1Q9R1N9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col13a1Q9R1N9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col13a1Q9R1N9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col13a1Q9R1N9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Col13a1Q9R1N9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.18■□□□□ 0.34
Col13a1Q9R1N9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col13a1Q9R1N9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col13a1Q9R1N9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col13a1Q9R1N9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Gm40848-201ENSMUST00000221998 324 ntBASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col13a1Q9R1N9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col13a1Q9R1N9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms