Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup50Q9JIH2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nup50Q9JIH2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup50Q9JIH2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup50Q9JIH2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
Nup50Q9JIH2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup50Q9JIH2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nup50Q9JIH2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup50Q9JIH2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.52■■□□□ 1.04
Nup50Q9JIH2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Nup50Q9JIH2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup50Q9JIH2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup50Q9JIH2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup50Q9JIH2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Nup50Q9JIH2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup50Q9JIH2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nup50Q9JIH2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
Nup50Q9JIH2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.5■■□□□ 1.03
Nup50Q9JIH2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Nup50Q9JIH2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nup50Q9JIH2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.49■■□□□ 1.03
Nup50Q9JIH2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nup50Q9JIH2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nup50Q9JIH2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nup50Q9JIH2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup50Q9JIH2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup50Q9JIH2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup50Q9JIH2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.47■■□□□ 1.03
Nup50Q9JIH2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.47■■□□□ 1.03
Nup50Q9JIH2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.47■■□□□ 1.03
Nup50Q9JIH2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup50Q9JIH2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Nup50Q9JIH2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup50Q9JIH2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nup50Q9JIH2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nup50Q9JIH2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.46■■□□□ 1.03
Nup50Q9JIH2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nup50Q9JIH2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup50Q9JIH2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Nup50Q9JIH2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Nup50Q9JIH2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Nup50Q9JIH2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.45■■□□□ 1.02
Nup50Q9JIH2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Nup50Q9JIH2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nup50Q9JIH2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Nup50Q9JIH2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup50Q9JIH2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup50Q9JIH2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.44■■□□□ 1.02
Nup50Q9JIH2 Gm7143-201ENSMUST00000222811 859 ntBASIC21.44■■□□□ 1.02
Nup50Q9JIH2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup50Q9JIH2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup50Q9JIH2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Nup50Q9JIH2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Nup50Q9JIH2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nup50Q9JIH2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Nup50Q9JIH2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nup50Q9JIH2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nup50Q9JIH2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms