Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.26■□□□□ 0.99
Timp4Q9JHB3 Mir7075-201ENSMUST00000184187 82 ntBASIC21.26■□□□□ 0.99
Timp4Q9JHB3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.26■□□□□ 0.99
Timp4Q9JHB3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Timp4Q9JHB3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Timp4Q9JHB3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Timp4Q9JHB3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.25■□□□□ 0.99
Timp4Q9JHB3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.25■□□□□ 0.99
Timp4Q9JHB3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Timp4Q9JHB3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Timp4Q9JHB3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Timp4Q9JHB3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Timp4Q9JHB3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Timp4Q9JHB3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Timp4Q9JHB3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.24■□□□□ 0.99
Timp4Q9JHB3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Timp4Q9JHB3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Timp4Q9JHB3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Gm12251-201ENSMUST00000117893 792 ntBASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Timp4Q9JHB3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp4Q9JHB3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Timp4Q9JHB3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Timp4Q9JHB3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Timp4Q9JHB3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.2■□□□□ 0.98
Timp4Q9JHB3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Timp4Q9JHB3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Timp4Q9JHB3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Timp4Q9JHB3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Timp4Q9JHB3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Timp4Q9JHB3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Timp4Q9JHB3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Timp4Q9JHB3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Timp4Q9JHB3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Timp4Q9JHB3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Timp4Q9JHB3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Timp4Q9JHB3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Timp4Q9JHB3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Timp4Q9JHB3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.18■□□□□ 0.98
Timp4Q9JHB3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.18■□□□□ 0.98
Timp4Q9JHB3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Timp4Q9JHB3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Timp4Q9JHB3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Timp4Q9JHB3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Timp4Q9JHB3 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.17■□□□□ 0.98
Timp4Q9JHB3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Timp4Q9JHB3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Timp4Q9JHB3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Timp4Q9JHB3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Timp4Q9JHB3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Timp4Q9JHB3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp4Q9JHB3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Timp4Q9JHB3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Timp4Q9JHB3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Timp4Q9JHB3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Timp4Q9JHB3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Timp4Q9JHB3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Timp4Q9JHB3 Gm8493-201ENSMUST00000196881 489 ntBASIC21.15■□□□□ 0.98
Timp4Q9JHB3 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms