Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nif3l1Q9EQ80 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nif3l1Q9EQ80 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nif3l1Q9EQ80 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nif3l1Q9EQ80 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Nif3l1Q9EQ80 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.19■□□□□ 0.82
Nif3l1Q9EQ80 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nif3l1Q9EQ80 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nif3l1Q9EQ80 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nif3l1Q9EQ80 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.18■□□□□ 0.82
Nif3l1Q9EQ80 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nif3l1Q9EQ80 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nif3l1Q9EQ80 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nif3l1Q9EQ80 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nif3l1Q9EQ80 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nif3l1Q9EQ80 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nif3l1Q9EQ80 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.17■□□□□ 0.82
Nif3l1Q9EQ80 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nif3l1Q9EQ80 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nif3l1Q9EQ80 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Nif3l1Q9EQ80 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.17■□□□□ 0.82
Nif3l1Q9EQ80 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nif3l1Q9EQ80 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nif3l1Q9EQ80 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.16■□□□□ 0.82
Nif3l1Q9EQ80 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nif3l1Q9EQ80 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.16■□□□□ 0.82
Nif3l1Q9EQ80 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.16■□□□□ 0.82
Nif3l1Q9EQ80 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nif3l1Q9EQ80 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nif3l1Q9EQ80 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nif3l1Q9EQ80 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nif3l1Q9EQ80 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nif3l1Q9EQ80 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nif3l1Q9EQ80 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nif3l1Q9EQ80 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nif3l1Q9EQ80 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.13■□□□□ 0.81
Nif3l1Q9EQ80 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nif3l1Q9EQ80 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.13■□□□□ 0.81
Nif3l1Q9EQ80 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nif3l1Q9EQ80 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nif3l1Q9EQ80 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nif3l1Q9EQ80 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nif3l1Q9EQ80 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nif3l1Q9EQ80 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Nif3l1Q9EQ80 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.12■□□□□ 0.81
Nif3l1Q9EQ80 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nif3l1Q9EQ80 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Nif3l1Q9EQ80 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nif3l1Q9EQ80 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nif3l1Q9EQ80 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms