Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Upf1Q9EPU0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.78■■□□□ 1.4
Upf1Q9EPU0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Upf1Q9EPU0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Upf1Q9EPU0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC23.77■■□□□ 1.4
Upf1Q9EPU0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Upf1Q9EPU0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Upf1Q9EPU0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Upf1Q9EPU0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Upf1Q9EPU0 Amer2-203ENSMUST00000225247 2662 ntBASIC23.75■■□□□ 1.39
Upf1Q9EPU0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Upf1Q9EPU0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Upf1Q9EPU0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Upf1Q9EPU0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Upf1Q9EPU0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Upf1Q9EPU0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Upf1Q9EPU0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Upf1Q9EPU0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.73■■□□□ 1.39
Upf1Q9EPU0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Upf1Q9EPU0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Upf1Q9EPU0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.72■■□□□ 1.39
Upf1Q9EPU0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.72■■□□□ 1.39
Upf1Q9EPU0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Upf1Q9EPU0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Upf1Q9EPU0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Upf1Q9EPU0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC23.69■■□□□ 1.38
Upf1Q9EPU0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Upf1Q9EPU0 Trmt13-210ENSMUST00000198454 880 ntBASIC23.69■■□□□ 1.38
Upf1Q9EPU0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Upf1Q9EPU0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Upf1Q9EPU0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Upf1Q9EPU0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Upf1Q9EPU0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Upf1Q9EPU0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Gm7290-201ENSMUST00000104990 617 ntBASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Gm12918-201ENSMUST00000120234 636 ntBASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Gm15710-201ENSMUST00000121821 636 ntBASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Gm5075-201ENSMUST00000196916 622 ntBASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Upf1Q9EPU0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Upf1Q9EPU0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Upf1Q9EPU0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Upf1Q9EPU0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC23.65■■□□□ 1.38
Upf1Q9EPU0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Upf1Q9EPU0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Upf1Q9EPU0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC23.64■■□□□ 1.37
Upf1Q9EPU0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Upf1Q9EPU0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.63■■□□□ 1.37
Upf1Q9EPU0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Upf1Q9EPU0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Upf1Q9EPU0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.62■■□□□ 1.37
Upf1Q9EPU0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.62■■□□□ 1.37
Upf1Q9EPU0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.62■■□□□ 1.37
Upf1Q9EPU0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Upf1Q9EPU0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms