Protein–RNA interactions for Protein: Q9D8T0

Fam3a, Protein FAM3A, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam3aQ9D8T0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam3aQ9D8T0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam3aQ9D8T0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.03■□□□□ 0.96
Fam3aQ9D8T0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam3aQ9D8T0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fam3aQ9D8T0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Fam3aQ9D8T0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam3aQ9D8T0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam3aQ9D8T0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fam3aQ9D8T0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.01■□□□□ 0.95
Fam3aQ9D8T0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam3aQ9D8T0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam3aQ9D8T0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam3aQ9D8T0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Fam3aQ9D8T0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Fam3aQ9D8T0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam3aQ9D8T0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.99■□□□□ 0.95
Fam3aQ9D8T0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Fam3aQ9D8T0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Fam3aQ9D8T0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.99■□□□□ 0.95
Fam3aQ9D8T0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam3aQ9D8T0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam3aQ9D8T0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam3aQ9D8T0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Fam3aQ9D8T0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Fam3aQ9D8T0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam3aQ9D8T0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam3aQ9D8T0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam3aQ9D8T0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam3aQ9D8T0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fam3aQ9D8T0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam3aQ9D8T0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam3aQ9D8T0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.96■□□□□ 0.95
Fam3aQ9D8T0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.96■□□□□ 0.95
Fam3aQ9D8T0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam3aQ9D8T0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.96■□□□□ 0.95
Fam3aQ9D8T0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam3aQ9D8T0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Fam3aQ9D8T0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Fam3aQ9D8T0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.95■□□□□ 0.94
Fam3aQ9D8T0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Fam3aQ9D8T0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam3aQ9D8T0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fam3aQ9D8T0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Fam3aQ9D8T0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fam3aQ9D8T0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Fam3aQ9D8T0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Fam3aQ9D8T0 Gm43530-201ENSMUST00000195920 274 ntBASIC20.94■□□□□ 0.94
Fam3aQ9D8T0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
Fam3aQ9D8T0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fam3aQ9D8T0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Fam3aQ9D8T0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fam3aQ9D8T0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.92■□□□□ 0.94
Fam3aQ9D8T0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam3aQ9D8T0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Fam3aQ9D8T0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam3aQ9D8T0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam3aQ9D8T0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam3aQ9D8T0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms