Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd2Q9D7V2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd2Q9D7V2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd2Q9D7V2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd2Q9D7V2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd2Q9D7V2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd2Q9D7V2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.79■□□□□ 0.28
Lysmd2Q9D7V2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.79■□□□□ 0.28
Lysmd2Q9D7V2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lysmd2Q9D7V2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd2Q9D7V2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd2Q9D7V2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Lysmd2Q9D7V2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lysmd2Q9D7V2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.77■□□□□ 0.27
Lysmd2Q9D7V2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd2Q9D7V2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd2Q9D7V2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd2Q9D7V2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd2Q9D7V2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd2Q9D7V2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd2Q9D7V2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd2Q9D7V2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd2Q9D7V2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd2Q9D7V2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms