Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d4aQ9D7V1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sh2d4aQ9D7V1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sh2d4aQ9D7V1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 Mir6538-201ENSMUST00000183713 110 ntBASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh2d4aQ9D7V1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d4aQ9D7V1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Sh2d4aQ9D7V1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d4aQ9D7V1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d4aQ9D7V1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d4aQ9D7V1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.55■□□□□ 0.72
Sh2d4aQ9D7V1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d4aQ9D7V1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d4aQ9D7V1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d4aQ9D7V1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d4aQ9D7V1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sh2d4aQ9D7V1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d4aQ9D7V1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh2d4aQ9D7V1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sh2d4aQ9D7V1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Sh2d4aQ9D7V1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sh2d4aQ9D7V1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sh2d4aQ9D7V1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sh2d4aQ9D7V1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms