Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim42Q9D2H5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim42Q9D2H5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim42Q9D2H5 Scarna2-201ENSMUST00000157560 414 ntBASIC20.17■□□□□ 0.82
Trim42Q9D2H5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim42Q9D2H5 Gm16437-201ENSMUST00000025669 507 ntBASIC20.17■□□□□ 0.82
Trim42Q9D2H5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim42Q9D2H5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.17■□□□□ 0.82
Trim42Q9D2H5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim42Q9D2H5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim42Q9D2H5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Golph3-202ENSMUST00000226517 2359 ntBASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim42Q9D2H5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim42Q9D2H5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim42Q9D2H5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim42Q9D2H5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim42Q9D2H5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.15■□□□□ 0.82
Trim42Q9D2H5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim42Q9D2H5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim42Q9D2H5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Trim42Q9D2H5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim42Q9D2H5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trim42Q9D2H5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim42Q9D2H5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim42Q9D2H5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim42Q9D2H5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim42Q9D2H5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim42Q9D2H5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim42Q9D2H5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim42Q9D2H5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.11■□□□□ 0.81
Trim42Q9D2H5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Gm11687-201ENSMUST00000118911 886 ntBASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim42Q9D2H5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim42Q9D2H5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms