Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cthrc1Q9D1D6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Gm12922-201ENSMUST00000120626 809 ntBASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cthrc1Q9D1D6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cthrc1Q9D1D6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cthrc1Q9D1D6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Cthrc1Q9D1D6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cthrc1Q9D1D6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cthrc1Q9D1D6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cthrc1Q9D1D6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cthrc1Q9D1D6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cthrc1Q9D1D6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cthrc1Q9D1D6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cthrc1Q9D1D6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cthrc1Q9D1D6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cthrc1Q9D1D6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cthrc1Q9D1D6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cthrc1Q9D1D6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cthrc1Q9D1D6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cthrc1Q9D1D6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Cthrc1Q9D1D6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.89■□□□□ 0.61
Cthrc1Q9D1D6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Cthrc1Q9D1D6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cthrc1Q9D1D6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cthrc1Q9D1D6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cthrc1Q9D1D6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.87■□□□□ 0.61
Cthrc1Q9D1D6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.87■□□□□ 0.61
Cthrc1Q9D1D6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cthrc1Q9D1D6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cthrc1Q9D1D6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cthrc1Q9D1D6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cthrc1Q9D1D6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cthrc1Q9D1D6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cthrc1Q9D1D6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cthrc1Q9D1D6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.84■□□□□ 0.61
Cthrc1Q9D1D6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cthrc1Q9D1D6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Cthrc1Q9D1D6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cthrc1Q9D1D6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.84■□□□□ 0.61
Cthrc1Q9D1D6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cthrc1Q9D1D6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cthrc1Q9D1D6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms