Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nde1Q9CZA6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nde1Q9CZA6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nde1Q9CZA6 Gm11687-201ENSMUST00000118911 886 ntBASIC19.72■□□□□ 0.75
Nde1Q9CZA6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nde1Q9CZA6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nde1Q9CZA6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Gm16437-201ENSMUST00000025669 507 ntBASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nde1Q9CZA6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nde1Q9CZA6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nde1Q9CZA6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nde1Q9CZA6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nde1Q9CZA6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nde1Q9CZA6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nde1Q9CZA6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nde1Q9CZA6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nde1Q9CZA6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nde1Q9CZA6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nde1Q9CZA6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nde1Q9CZA6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nde1Q9CZA6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nde1Q9CZA6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nde1Q9CZA6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nde1Q9CZA6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nde1Q9CZA6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nde1Q9CZA6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nde1Q9CZA6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nde1Q9CZA6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nde1Q9CZA6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nde1Q9CZA6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nde1Q9CZA6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 633.8 ms