Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1r1Q9CYQ5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1r1Q9CYQ5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1r1Q9CYQ5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Gm27502-201ENSMUST00000183495 199 ntBASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hcfc1r1Q9CYQ5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1r1Q9CYQ5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hcfc1r1Q9CYQ5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.59■□□□□ 0.41
Hcfc1r1Q9CYQ5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1r1Q9CYQ5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1r1Q9CYQ5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.59■□□□□ 0.41
Hcfc1r1Q9CYQ5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1r1Q9CYQ5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1r1Q9CYQ5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1r1Q9CYQ5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcfc1r1Q9CYQ5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.58■□□□□ 0.41
Hcfc1r1Q9CYQ5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcfc1r1Q9CYQ5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1r1Q9CYQ5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc1r1Q9CYQ5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc1r1Q9CYQ5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hcfc1r1Q9CYQ5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.57■□□□□ 0.4
Hcfc1r1Q9CYQ5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.57■□□□□ 0.4
Hcfc1r1Q9CYQ5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc1r1Q9CYQ5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc1r1Q9CYQ5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.57■□□□□ 0.4
Hcfc1r1Q9CYQ5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1r1Q9CYQ5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1r1Q9CYQ5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1r1Q9CYQ5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1r1Q9CYQ5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1r1Q9CYQ5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1r1Q9CYQ5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hcfc1r1Q9CYQ5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1r1Q9CYQ5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hcfc1r1Q9CYQ5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.54■□□□□ 0.4
Hcfc1r1Q9CYQ5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1r1Q9CYQ5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Hcfc1r1Q9CYQ5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1r1Q9CYQ5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1r1Q9CYQ5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Hcfc1r1Q9CYQ5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1r1Q9CYQ5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1r1Q9CYQ5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.52■□□□□ 0.4
Hcfc1r1Q9CYQ5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc1r1Q9CYQ5 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.52■□□□□ 0.4
Hcfc1r1Q9CYQ5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc1r1Q9CYQ5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc1r1Q9CYQ5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hcfc1r1Q9CYQ5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc1r1Q9CYQ5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc1r1Q9CYQ5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms