Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ssr1Q9CY50 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ssr1Q9CY50 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ssr1Q9CY50 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.85■■□□□ 1.09
Ssr1Q9CY50 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.85■■□□□ 1.09
Ssr1Q9CY50 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ssr1Q9CY50 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ssr1Q9CY50 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ssr1Q9CY50 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssr1Q9CY50 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ssr1Q9CY50 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssr1Q9CY50 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssr1Q9CY50 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssr1Q9CY50 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.84■■□□□ 1.09
Ssr1Q9CY50 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssr1Q9CY50 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ssr1Q9CY50 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ssr1Q9CY50 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ssr1Q9CY50 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssr1Q9CY50 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssr1Q9CY50 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssr1Q9CY50 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssr1Q9CY50 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssr1Q9CY50 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ssr1Q9CY50 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.08
Ssr1Q9CY50 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ssr1Q9CY50 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ssr1Q9CY50 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Gm13238-201ENSMUST00000117655 780 ntBASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.82■■□□□ 1.08
Ssr1Q9CY50 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.81■■□□□ 1.08
Ssr1Q9CY50 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ssr1Q9CY50 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ssr1Q9CY50 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ssr1Q9CY50 Gm5921-201ENSMUST00000075898 882 ntBASIC21.81■■□□□ 1.08
Ssr1Q9CY50 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ssr1Q9CY50 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.8■■□□□ 1.08
Ssr1Q9CY50 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.8■■□□□ 1.08
Ssr1Q9CY50 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ssr1Q9CY50 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ssr1Q9CY50 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Ssr1Q9CY50 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssr1Q9CY50 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ssr1Q9CY50 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ssr1Q9CY50 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ssr1Q9CY50 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ssr1Q9CY50 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ssr1Q9CY50 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ssr1Q9CY50 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ssr1Q9CY50 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Ssr1Q9CY50 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ssr1Q9CY50 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ssr1Q9CY50 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ssr1Q9CY50 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ssr1Q9CY50 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ssr1Q9CY50 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Gm43566-201ENSMUST00000196851 808 ntBASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ssr1Q9CY50 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ssr1Q9CY50 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssr1Q9CY50 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ssr1Q9CY50 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.74■■□□□ 1.07
Ssr1Q9CY50 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssr1Q9CY50 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ssr1Q9CY50 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms