Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh15Q99PJ1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh15Q99PJ1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh15Q99PJ1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh15Q99PJ1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh15Q99PJ1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh15Q99PJ1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh15Q99PJ1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh15Q99PJ1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh15Q99PJ1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.7■■□□□ 1.39
Pcdh15Q99PJ1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdh15Q99PJ1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Pcdh15Q99PJ1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Pcdh15Q99PJ1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Pcdh15Q99PJ1 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.7■■□□□ 1.38
Pcdh15Q99PJ1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh15Q99PJ1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh15Q99PJ1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh15Q99PJ1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh15Q99PJ1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh15Q99PJ1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh15Q99PJ1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh15Q99PJ1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh15Q99PJ1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh15Q99PJ1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Pcdh15Q99PJ1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh15Q99PJ1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh15Q99PJ1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh15Q99PJ1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh15Q99PJ1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh15Q99PJ1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.68■■□□□ 1.38
Pcdh15Q99PJ1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
Pcdh15Q99PJ1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh15Q99PJ1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Pcdh15Q99PJ1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh15Q99PJ1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh15Q99PJ1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdh15Q99PJ1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.66■■□□□ 1.38
Pcdh15Q99PJ1 Gm13234-201ENSMUST00000120010 747 ntBASIC23.66■■□□□ 1.38
Pcdh15Q99PJ1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh15Q99PJ1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh15Q99PJ1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.65■■□□□ 1.38
Pcdh15Q99PJ1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh15Q99PJ1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh15Q99PJ1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Pcdh15Q99PJ1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.65■■□□□ 1.38
Pcdh15Q99PJ1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh15Q99PJ1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Pcdh15Q99PJ1 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.65■■□□□ 1.38
Pcdh15Q99PJ1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.38
Pcdh15Q99PJ1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdh15Q99PJ1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdh15Q99PJ1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdh15Q99PJ1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.64■■□□□ 1.37
Pcdh15Q99PJ1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdh15Q99PJ1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdh15Q99PJ1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 Gm9988-201ENSMUST00000069786 435 ntBASIC23.63■■□□□ 1.37
Pcdh15Q99PJ1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh15Q99PJ1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh15Q99PJ1 Reep4-203ENSMUST00000226563 1444 ntBASIC23.62■■□□□ 1.37
Pcdh15Q99PJ1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Pcdh15Q99PJ1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh15Q99PJ1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh15Q99PJ1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh15Q99PJ1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh15Q99PJ1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh15Q99PJ1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Pcdh15Q99PJ1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.59■■□□□ 1.37
Pcdh15Q99PJ1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms