Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx6-1Q99MA9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx6-1Q99MA9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx6-1Q99MA9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Nkx6-1Q99MA9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nkx6-1Q99MA9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx6-1Q99MA9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx6-1Q99MA9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx6-1Q99MA9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx6-1Q99MA9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx6-1Q99MA9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.11■□□□□ 0.65
Nkx6-1Q99MA9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx6-1Q99MA9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Nkx6-1Q99MA9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx6-1Q99MA9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx6-1Q99MA9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Nkx6-1Q99MA9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx6-1Q99MA9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx6-1Q99MA9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx6-1Q99MA9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.04■□□□□ 0.64
Nkx6-1Q99MA9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.04■□□□□ 0.64
Nkx6-1Q99MA9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx6-1Q99MA9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nkx6-1Q99MA9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.04■□□□□ 0.64
Nkx6-1Q99MA9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nkx6-1Q99MA9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx6-1Q99MA9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nkx6-1Q99MA9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx6-1Q99MA9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.03■□□□□ 0.64
Nkx6-1Q99MA9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms