Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab28Q99KL7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab28Q99KL7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab28Q99KL7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab28Q99KL7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab28Q99KL7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.69■□□□□ 0.74
Rab28Q99KL7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab28Q99KL7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.69■□□□□ 0.74
Rab28Q99KL7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.68■□□□□ 0.74
Rab28Q99KL7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Rab28Q99KL7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab28Q99KL7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab28Q99KL7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab28Q99KL7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.68■□□□□ 0.74
Rab28Q99KL7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab28Q99KL7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rab28Q99KL7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab28Q99KL7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab28Q99KL7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab28Q99KL7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab28Q99KL7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab28Q99KL7 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.67■□□□□ 0.74
Rab28Q99KL7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.67■□□□□ 0.74
Rab28Q99KL7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab28Q99KL7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab28Q99KL7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rab28Q99KL7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab28Q99KL7 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.66■□□□□ 0.74
Rab28Q99KL7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.66■□□□□ 0.74
Rab28Q99KL7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab28Q99KL7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.66■□□□□ 0.74
Rab28Q99KL7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab28Q99KL7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab28Q99KL7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rab28Q99KL7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab28Q99KL7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rab28Q99KL7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rab28Q99KL7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rab28Q99KL7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.64■□□□□ 0.73
Rab28Q99KL7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab28Q99KL7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab28Q99KL7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab28Q99KL7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab28Q99KL7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab28Q99KL7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rab28Q99KL7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab28Q99KL7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab28Q99KL7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rab28Q99KL7 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.63■□□□□ 0.73
Rab28Q99KL7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.62■□□□□ 0.73
Rab28Q99KL7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab28Q99KL7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Rab28Q99KL7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab28Q99KL7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab28Q99KL7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab28Q99KL7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Rab28Q99KL7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms