Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prdm9Q96EQ9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prdm9Q96EQ9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.06■□□□□ 0.8
Prdm9Q96EQ9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.06■□□□□ 0.8
Prdm9Q96EQ9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.06■□□□□ 0.8
Prdm9Q96EQ9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.05■□□□□ 0.8
Prdm9Q96EQ9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.05■□□□□ 0.8
Prdm9Q96EQ9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prdm9Q96EQ9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Prdm9Q96EQ9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm9Q96EQ9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm9Q96EQ9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm9Q96EQ9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.03■□□□□ 0.8
Prdm9Q96EQ9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
Prdm9Q96EQ9 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.03■□□□□ 0.8
Prdm9Q96EQ9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm9Q96EQ9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Prdm9Q96EQ9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Prdm9Q96EQ9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prdm9Q96EQ9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prdm9Q96EQ9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.02■□□□□ 0.8
Prdm9Q96EQ9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Prdm9Q96EQ9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm9Q96EQ9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm9Q96EQ9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm9Q96EQ9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Prdm9Q96EQ9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm9Q96EQ9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20■□□□□ 0.79
Prdm9Q96EQ9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm9Q96EQ9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm9Q96EQ9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm9Q96EQ9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 Serp2-204ENSMUST00000228055 705 ntBASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm9Q96EQ9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm9Q96EQ9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm9Q96EQ9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm9Q96EQ9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm9Q96EQ9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm9Q96EQ9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm9Q96EQ9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms