Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha2Q91Y17 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha2Q91Y17 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha2Q91Y17 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.77■■□□□ 1.08
Pcdha2Q91Y17 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha2Q91Y17 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.77■■□□□ 1.08
Pcdha2Q91Y17 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha2Q91Y17 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.77■■□□□ 1.08
Pcdha2Q91Y17 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha2Q91Y17 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
Pcdha2Q91Y17 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Pcdha2Q91Y17 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha2Q91Y17 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdha2Q91Y17 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.76■■□□□ 1.07
Pcdha2Q91Y17 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha2Q91Y17 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha2Q91Y17 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdha2Q91Y17 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha2Q91Y17 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.75■■□□□ 1.07
Pcdha2Q91Y17 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.75■■□□□ 1.07
Pcdha2Q91Y17 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.75■■□□□ 1.07
Pcdha2Q91Y17 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdha2Q91Y17 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha2Q91Y17 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pcdha2Q91Y17 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.74■■□□□ 1.07
Pcdha2Q91Y17 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha2Q91Y17 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha2Q91Y17 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha2Q91Y17 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha2Q91Y17 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha2Q91Y17 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha2Q91Y17 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha2Q91Y17 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha2Q91Y17 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha2Q91Y17 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha2Q91Y17 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha2Q91Y17 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha2Q91Y17 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdha2Q91Y17 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdha2Q91Y17 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdha2Q91Y17 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha2Q91Y17 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdha2Q91Y17 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha2Q91Y17 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha2Q91Y17 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha2Q91Y17 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha2Q91Y17 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha2Q91Y17 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha2Q91Y17 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha2Q91Y17 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha2Q91Y17 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdha2Q91Y17 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha2Q91Y17 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha2Q91Y17 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms