Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb20Q91XZ9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb20Q91XZ9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb20Q91XZ9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb20Q91XZ9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.5■□□□□ 0.71
Pcdhb20Q91XZ9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb20Q91XZ9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb20Q91XZ9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb20Q91XZ9 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb20Q91XZ9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhb20Q91XZ9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb20Q91XZ9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.48■□□□□ 0.71
Pcdhb20Q91XZ9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhb20Q91XZ9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb20Q91XZ9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb20Q91XZ9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhb20Q91XZ9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhb20Q91XZ9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb20Q91XZ9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb20Q91XZ9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.46■□□□□ 0.71
Pcdhb20Q91XZ9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb20Q91XZ9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb20Q91XZ9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb20Q91XZ9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb20Q91XZ9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb20Q91XZ9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb20Q91XZ9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb20Q91XZ9 Gm45691-201ENSMUST00000206905 1120 ntBASIC19.44■□□□□ 0.7
Pcdhb20Q91XZ9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb20Q91XZ9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb20Q91XZ9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb20Q91XZ9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb20Q91XZ9 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC19.43■□□□□ 0.7
Pcdhb20Q91XZ9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhb20Q91XZ9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb20Q91XZ9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb20Q91XZ9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb20Q91XZ9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb20Q91XZ9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb20Q91XZ9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.41■□□□□ 0.7
Pcdhb20Q91XZ9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb20Q91XZ9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb20Q91XZ9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb20Q91XZ9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb20Q91XZ9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhb20Q91XZ9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms