Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Gm45102-201ENSMUST00000207427 857 ntBASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb6Q91XZ4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb6Q91XZ4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb6Q91XZ4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb6Q91XZ4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb6Q91XZ4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Gm9870-201ENSMUST00000063874 645 ntBASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb6Q91XZ4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb6Q91XZ4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb6Q91XZ4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdhb6Q91XZ4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb6Q91XZ4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb6Q91XZ4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhb6Q91XZ4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb6Q91XZ4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb6Q91XZ4 Gm22238-201ENSMUST00000175222 88 ntBASIC20.92■□□□□ 0.94
Pcdhb6Q91XZ4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Pcdhb6Q91XZ4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhb6Q91XZ4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb6Q91XZ4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb6Q91XZ4 Gm14117-201ENSMUST00000122417 843 ntBASIC20.89■□□□□ 0.93
Pcdhb6Q91XZ4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb6Q91XZ4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdhb6Q91XZ4 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.89■□□□□ 0.93
Pcdhb6Q91XZ4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb6Q91XZ4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb6Q91XZ4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb6Q91XZ4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 Rps24-207ENSMUST00000224568 714 ntBASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcdhb6Q91XZ4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Pcdhb6Q91XZ4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhb6Q91XZ4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhb6Q91XZ4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhb6Q91XZ4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb6Q91XZ4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb6Q91XZ4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb6Q91XZ4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb6Q91XZ4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb6Q91XZ4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms