Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb17Q91VD8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Pcdhb17Q91VD8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdhb17Q91VD8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb17Q91VD8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb17Q91VD8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb17Q91VD8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb17Q91VD8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb17Q91VD8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21■□□□□ 0.95
Pcdhb17Q91VD8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb17Q91VD8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb17Q91VD8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb17Q91VD8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Gm21956-201ENSMUST00000179946 522 ntBASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb17Q91VD8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb17Q91VD8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb17Q91VD8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb17Q91VD8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb17Q91VD8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb17Q91VD8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb17Q91VD8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Pcdhb17Q91VD8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb17Q91VD8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb17Q91VD8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdhb17Q91VD8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb17Q91VD8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb17Q91VD8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdhb17Q91VD8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb17Q91VD8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb17Q91VD8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb17Q91VD8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb17Q91VD8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb17Q91VD8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb17Q91VD8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb17Q91VD8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb17Q91VD8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb17Q91VD8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb17Q91VD8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb17Q91VD8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb17Q91VD8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Pcdhb17Q91VD8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhb17Q91VD8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb17Q91VD8 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb17Q91VD8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcdhb17Q91VD8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb17Q91VD8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb17Q91VD8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb17Q91VD8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Pcdhb17Q91VD8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb17Q91VD8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb17Q91VD8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb17Q91VD8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb17Q91VD8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb17Q91VD8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Pcdhb17Q91VD8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb17Q91VD8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb17Q91VD8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms