Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.08■□□□□ 0.8
Pcdhb21Q91V48 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb21Q91V48 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb21Q91V48 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb21Q91V48 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Gm12922-201ENSMUST00000120626 809 ntBASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb21Q91V48 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb21Q91V48 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb21Q91V48 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb21Q91V48 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb21Q91V48 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb21Q91V48 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb21Q91V48 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb21Q91V48 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb21Q91V48 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb21Q91V48 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb21Q91V48 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb21Q91V48 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdhb21Q91V48 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb21Q91V48 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdhb21Q91V48 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb21Q91V48 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdhb21Q91V48 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb21Q91V48 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb21Q91V48 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb21Q91V48 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb21Q91V48 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb21Q91V48 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb21Q91V48 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb21Q91V48 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms