Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
H1fooQ8VIK3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H1fooQ8VIK3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Gm15820-201ENSMUST00000201566 728 ntBASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
H1fooQ8VIK3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H1fooQ8VIK3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Gm40881-201ENSMUST00000223397 166 ntBASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H1fooQ8VIK3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H1fooQ8VIK3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H1fooQ8VIK3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
H1fooQ8VIK3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms