Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TraipQ8VIG6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TraipQ8VIG6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TraipQ8VIG6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TraipQ8VIG6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.73■■□□□ 1.07
TraipQ8VIG6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.73■■□□□ 1.07
TraipQ8VIG6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TraipQ8VIG6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TraipQ8VIG6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.73■■□□□ 1.07
TraipQ8VIG6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TraipQ8VIG6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TraipQ8VIG6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TraipQ8VIG6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TraipQ8VIG6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TraipQ8VIG6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TraipQ8VIG6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
TraipQ8VIG6 Gm8495-201ENSMUST00000188740 694 ntBASIC21.72■■□□□ 1.07
TraipQ8VIG6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TraipQ8VIG6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TraipQ8VIG6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TraipQ8VIG6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TraipQ8VIG6 Gm18284-201ENSMUST00000172604 624 ntBASIC21.71■■□□□ 1.07
TraipQ8VIG6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
TraipQ8VIG6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.71■■□□□ 1.07
TraipQ8VIG6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TraipQ8VIG6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TraipQ8VIG6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TraipQ8VIG6 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.71■■□□□ 1.07
TraipQ8VIG6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
TraipQ8VIG6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TraipQ8VIG6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.7■■□□□ 1.06
TraipQ8VIG6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TraipQ8VIG6 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.69■■□□□ 1.06
TraipQ8VIG6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TraipQ8VIG6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TraipQ8VIG6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TraipQ8VIG6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TraipQ8VIG6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.68■■□□□ 1.06
TraipQ8VIG6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TraipQ8VIG6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.68■■□□□ 1.06
TraipQ8VIG6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TraipQ8VIG6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TraipQ8VIG6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TraipQ8VIG6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TraipQ8VIG6 Mir6236-201ENSMUST00000184437 123 ntBASIC21.67■■□□□ 1.06
TraipQ8VIG6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TraipQ8VIG6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TraipQ8VIG6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TraipQ8VIG6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TraipQ8VIG6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
TraipQ8VIG6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TraipQ8VIG6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TraipQ8VIG6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TraipQ8VIG6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TraipQ8VIG6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TraipQ8VIG6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TraipQ8VIG6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TraipQ8VIG6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TraipQ8VIG6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TraipQ8VIG6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TraipQ8VIG6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TraipQ8VIG6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TraipQ8VIG6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.64■■□□□ 1.05
TraipQ8VIG6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms