Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40bQ8VHP8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.27■□□□□ 0.52
Rab40bQ8VHP8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rab40bQ8VHP8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Gm14523-201ENSMUST00000117260 558 ntBASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40bQ8VHP8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rab40bQ8VHP8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40bQ8VHP8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40bQ8VHP8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.24■□□□□ 0.51
Rab40bQ8VHP8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40bQ8VHP8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40bQ8VHP8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Rab40bQ8VHP8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40bQ8VHP8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40bQ8VHP8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40bQ8VHP8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40bQ8VHP8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40bQ8VHP8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 Gm27502-201ENSMUST00000183495 199 ntBASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms