Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Lmcd1Q8VEE1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lmcd1Q8VEE1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lmcd1Q8VEE1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Lmcd1Q8VEE1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.87■■□□□ 1.09
Lmcd1Q8VEE1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.87■■□□□ 1.09
Lmcd1Q8VEE1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lmcd1Q8VEE1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lmcd1Q8VEE1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lmcd1Q8VEE1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lmcd1Q8VEE1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lmcd1Q8VEE1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lmcd1Q8VEE1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lmcd1Q8VEE1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Lmcd1Q8VEE1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lmcd1Q8VEE1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Gm8520-201ENSMUST00000186517 868 ntBASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Gm9988-201ENSMUST00000069786 435 ntBASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lmcd1Q8VEE1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.84■■□□□ 1.09
Lmcd1Q8VEE1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lmcd1Q8VEE1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lmcd1Q8VEE1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lmcd1Q8VEE1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lmcd1Q8VEE1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lmcd1Q8VEE1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lmcd1Q8VEE1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.83■■□□□ 1.09
Lmcd1Q8VEE1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Lmcd1Q8VEE1 Gm13234-201ENSMUST00000120010 747 ntBASIC21.83■■□□□ 1.09
Lmcd1Q8VEE1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.83■■□□□ 1.09
Lmcd1Q8VEE1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lmcd1Q8VEE1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lmcd1Q8VEE1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lmcd1Q8VEE1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lmcd1Q8VEE1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Lmcd1Q8VEE1 Gm4968-201ENSMUST00000071458 858 ntBASIC21.82■■□□□ 1.08
Lmcd1Q8VEE1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lmcd1Q8VEE1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lmcd1Q8VEE1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lmcd1Q8VEE1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lmcd1Q8VEE1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.81■■□□□ 1.08
Lmcd1Q8VEE1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lmcd1Q8VEE1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lmcd1Q8VEE1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lmcd1Q8VEE1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lmcd1Q8VEE1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lmcd1Q8VEE1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lmcd1Q8VEE1 Mir5133-201ENSMUST00000174955 77 ntBASIC21.78■■□□□ 1.08
Lmcd1Q8VEE1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lmcd1Q8VEE1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lmcd1Q8VEE1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
Lmcd1Q8VEE1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lmcd1Q8VEE1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Lmcd1Q8VEE1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lmcd1Q8VEE1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lmcd1Q8VEE1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Lmcd1Q8VEE1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lmcd1Q8VEE1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Lmcd1Q8VEE1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Lmcd1Q8VEE1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Lmcd1Q8VEE1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Lmcd1Q8VEE1 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.76■■□□□ 1.07
Lmcd1Q8VEE1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lmcd1Q8VEE1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.76■■□□□ 1.07
Lmcd1Q8VEE1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Lmcd1Q8VEE1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lmcd1Q8VEE1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lmcd1Q8VEE1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Lmcd1Q8VEE1 Mir7071-201ENSMUST00000184847 69 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms