Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.9■□□□□ 0.94
Rprd1aQ8VDS4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.9■□□□□ 0.94
Rprd1aQ8VDS4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rprd1aQ8VDS4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.89■□□□□ 0.94
Rprd1aQ8VDS4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rprd1aQ8VDS4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Rprd1aQ8VDS4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rprd1aQ8VDS4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rprd1aQ8VDS4 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.89■□□□□ 0.93
Rprd1aQ8VDS4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rprd1aQ8VDS4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rprd1aQ8VDS4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rprd1aQ8VDS4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rprd1aQ8VDS4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rprd1aQ8VDS4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
Rprd1aQ8VDS4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rprd1aQ8VDS4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rprd1aQ8VDS4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rprd1aQ8VDS4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rprd1aQ8VDS4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Rprd1aQ8VDS4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rprd1aQ8VDS4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rprd1aQ8VDS4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rprd1aQ8VDS4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rprd1aQ8VDS4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rprd1aQ8VDS4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rprd1aQ8VDS4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rprd1aQ8VDS4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rprd1aQ8VDS4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.83■□□□□ 0.93
Rprd1aQ8VDS4 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.83■□□□□ 0.93
Rprd1aQ8VDS4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rprd1aQ8VDS4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rprd1aQ8VDS4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Gm43530-201ENSMUST00000195920 274 ntBASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Rprd1aQ8VDS4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms