Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Ndc1Q8VCB1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ndc1Q8VCB1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ndc1Q8VCB1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ndc1Q8VCB1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ndc1Q8VCB1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ndc1Q8VCB1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndc1Q8VCB1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ndc1Q8VCB1 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ndc1Q8VCB1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ndc1Q8VCB1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.1■□□□□ 0.65
Ndc1Q8VCB1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ndc1Q8VCB1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ndc1Q8VCB1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Serp2-204ENSMUST00000228055 705 ntBASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.09■□□□□ 0.65
Ndc1Q8VCB1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ndc1Q8VCB1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ndc1Q8VCB1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ndc1Q8VCB1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndc1Q8VCB1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Ndc1Q8VCB1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ndc1Q8VCB1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.06■□□□□ 0.64
Ndc1Q8VCB1 Gm43137-201ENSMUST00000198052 594 ntBASIC19.06■□□□□ 0.64
Ndc1Q8VCB1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ndc1Q8VCB1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndc1Q8VCB1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms