Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf8Q8VC56 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf8Q8VC56 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf8Q8VC56 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf8Q8VC56 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf8Q8VC56 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf8Q8VC56 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rnf8Q8VC56 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf8Q8VC56 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf8Q8VC56 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf8Q8VC56 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.43■□□□□ 0.7
Rnf8Q8VC56 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf8Q8VC56 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf8Q8VC56 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Gm10399-202ENSMUST00000202768 748 ntBASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Rps24-207ENSMUST00000224568 714 ntBASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf8Q8VC56 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf8Q8VC56 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Rnf8Q8VC56 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf8Q8VC56 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.4■□□□□ 0.7
Rnf8Q8VC56 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.4■□□□□ 0.7
Rnf8Q8VC56 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf8Q8VC56 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf8Q8VC56 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf8Q8VC56 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rnf8Q8VC56 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rnf8Q8VC56 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rnf8Q8VC56 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf8Q8VC56 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf8Q8VC56 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf8Q8VC56 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.38■□□□□ 0.69
Rnf8Q8VC56 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf8Q8VC56 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf8Q8VC56 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf8Q8VC56 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rnf8Q8VC56 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf8Q8VC56 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf8Q8VC56 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Gm45102-201ENSMUST00000207427 857 ntBASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf8Q8VC56 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms