Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdt1Q8R4E9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cdt1Q8R4E9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdt1Q8R4E9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdt1Q8R4E9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdt1Q8R4E9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdt1Q8R4E9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdt1Q8R4E9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdt1Q8R4E9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdt1Q8R4E9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdt1Q8R4E9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cdt1Q8R4E9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdt1Q8R4E9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdt1Q8R4E9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdt1Q8R4E9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdt1Q8R4E9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdt1Q8R4E9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdt1Q8R4E9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Cdt1Q8R4E9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.58■□□□□ 0.72
Cdt1Q8R4E9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdt1Q8R4E9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdt1Q8R4E9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdt1Q8R4E9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdt1Q8R4E9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdt1Q8R4E9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdt1Q8R4E9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cdt1Q8R4E9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdt1Q8R4E9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdt1Q8R4E9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdt1Q8R4E9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdt1Q8R4E9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdt1Q8R4E9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.54■□□□□ 0.72
Cdt1Q8R4E9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdt1Q8R4E9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdt1Q8R4E9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cdt1Q8R4E9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdt1Q8R4E9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdt1Q8R4E9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.53■□□□□ 0.72
Cdt1Q8R4E9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdt1Q8R4E9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cdt1Q8R4E9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdt1Q8R4E9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdt1Q8R4E9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdt1Q8R4E9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdt1Q8R4E9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdt1Q8R4E9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdt1Q8R4E9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdt1Q8R4E9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms