Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cacnb1Q8R3Z5 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC22.56■■□□□ 1.2
Cacnb1Q8R3Z5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.56■■□□□ 1.2
Cacnb1Q8R3Z5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cacnb1Q8R3Z5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cacnb1Q8R3Z5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cacnb1Q8R3Z5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cacnb1Q8R3Z5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Cacnb1Q8R3Z5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
Cacnb1Q8R3Z5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.54■■□□□ 1.2
Cacnb1Q8R3Z5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cacnb1Q8R3Z5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cacnb1Q8R3Z5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cacnb1Q8R3Z5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 Gm7143-201ENSMUST00000222811 859 ntBASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacnb1Q8R3Z5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Gm9870-201ENSMUST00000063874 645 ntBASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cacnb1Q8R3Z5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cacnb1Q8R3Z5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.51■■□□□ 1.19
Cacnb1Q8R3Z5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Cacnb1Q8R3Z5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.51■■□□□ 1.19
Cacnb1Q8R3Z5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cacnb1Q8R3Z5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacnb1Q8R3Z5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cacnb1Q8R3Z5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cacnb1Q8R3Z5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cacnb1Q8R3Z5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cacnb1Q8R3Z5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.49■■□□□ 1.19
Cacnb1Q8R3Z5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cacnb1Q8R3Z5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Cacnb1Q8R3Z5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb1Q8R3Z5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cacnb1Q8R3Z5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cacnb1Q8R3Z5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cacnb1Q8R3Z5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cacnb1Q8R3Z5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.46■■□□□ 1.19
Cacnb1Q8R3Z5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.46■■□□□ 1.19
Cacnb1Q8R3Z5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms