Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r28Q8R2C9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r28Q8R2C9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vmn1r28Q8R2C9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r28Q8R2C9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r28Q8R2C9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r28Q8R2C9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r28Q8R2C9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r28Q8R2C9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r28Q8R2C9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r28Q8R2C9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r28Q8R2C9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vmn1r28Q8R2C9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Vmn1r28Q8R2C9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Vmn1r28Q8R2C9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Vmn1r28Q8R2C9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r28Q8R2C9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.64■□□□□ 0.57
Vmn1r28Q8R2C9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Vmn1r28Q8R2C9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r28Q8R2C9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r28Q8R2C9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r28Q8R2C9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r28Q8R2C9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vmn1r28Q8R2C9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r28Q8R2C9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.63■□□□□ 0.57
Vmn1r28Q8R2C9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r28Q8R2C9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r28Q8R2C9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r28Q8R2C9 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.63■□□□□ 0.57
Vmn1r28Q8R2C9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r28Q8R2C9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vmn1r28Q8R2C9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vmn1r28Q8R2C9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.61■□□□□ 0.57
Vmn1r28Q8R2C9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vmn1r28Q8R2C9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vmn1r28Q8R2C9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vmn1r28Q8R2C9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r28Q8R2C9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r28Q8R2C9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vmn1r28Q8R2C9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vmn1r28Q8R2C9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vmn1r28Q8R2C9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vmn1r28Q8R2C9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vmn1r28Q8R2C9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vmn1r28Q8R2C9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vmn1r28Q8R2C9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.58■□□□□ 0.56
Vmn1r28Q8R2C9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vmn1r28Q8R2C9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.58■□□□□ 0.56
Vmn1r28Q8R2C9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms