Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Atf7Q8R0S1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atf7Q8R0S1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atf7Q8R0S1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atf7Q8R0S1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atf7Q8R0S1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atf7Q8R0S1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atf7Q8R0S1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atf7Q8R0S1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atf7Q8R0S1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atf7Q8R0S1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atf7Q8R0S1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.02■■□□□ 1.44
Atf7Q8R0S1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atf7Q8R0S1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atf7Q8R0S1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Atf7Q8R0S1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atf7Q8R0S1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Atf7Q8R0S1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atf7Q8R0S1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.01■■□□□ 1.43
Atf7Q8R0S1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atf7Q8R0S1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atf7Q8R0S1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24■■□□□ 1.43
Atf7Q8R0S1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atf7Q8R0S1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atf7Q8R0S1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atf7Q8R0S1 Gm9870-201ENSMUST00000063874 645 ntBASIC24■■□□□ 1.43
Atf7Q8R0S1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atf7Q8R0S1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atf7Q8R0S1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Atf7Q8R0S1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC24■■□□□ 1.43
Atf7Q8R0S1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atf7Q8R0S1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atf7Q8R0S1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atf7Q8R0S1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Atf7Q8R0S1 Gm45102-201ENSMUST00000207427 857 ntBASIC23.99■■□□□ 1.43
Atf7Q8R0S1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Atf7Q8R0S1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atf7Q8R0S1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
Atf7Q8R0S1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atf7Q8R0S1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atf7Q8R0S1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Atf7Q8R0S1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.97■■□□□ 1.43
Atf7Q8R0S1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Gm22238-201ENSMUST00000175222 88 ntBASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Atf7Q8R0S1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atf7Q8R0S1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Atf7Q8R0S1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Atf7Q8R0S1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.95■■□□□ 1.42
Atf7Q8R0S1 Rps24-207ENSMUST00000224568 714 ntBASIC23.95■■□□□ 1.42
Atf7Q8R0S1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atf7Q8R0S1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atf7Q8R0S1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atf7Q8R0S1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atf7Q8R0S1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atf7Q8R0S1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Atf7Q8R0S1 Gm14117-201ENSMUST00000122417 843 ntBASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms