Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Neil1Q8K4Q6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Neil1Q8K4Q6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.64■□□□□ 0.41
Neil1Q8K4Q6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Neil1Q8K4Q6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Neil1Q8K4Q6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.63■□□□□ 0.41
Neil1Q8K4Q6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Gm13238-201ENSMUST00000117655 780 ntBASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Gm43566-201ENSMUST00000196851 808 ntBASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Gm45444-201ENSMUST00000211394 898 ntBASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Neil1Q8K4Q6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Neil1Q8K4Q6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Neil1Q8K4Q6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Neil1Q8K4Q6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Neil1Q8K4Q6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Neil1Q8K4Q6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Neil1Q8K4Q6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Neil1Q8K4Q6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Neil1Q8K4Q6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Neil1Q8K4Q6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.58■□□□□ 0.41
Neil1Q8K4Q6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Neil1Q8K4Q6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Neil1Q8K4Q6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.58■□□□□ 0.4
Neil1Q8K4Q6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Neil1Q8K4Q6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Neil1Q8K4Q6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Neil1Q8K4Q6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Neil1Q8K4Q6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Neil1Q8K4Q6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Neil1Q8K4Q6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Neil1Q8K4Q6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.57■□□□□ 0.4
Neil1Q8K4Q6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Neil1Q8K4Q6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Neil1Q8K4Q6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Neil1Q8K4Q6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Neil1Q8K4Q6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.57■□□□□ 0.4
Neil1Q8K4Q6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Neil1Q8K4Q6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Neil1Q8K4Q6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
Neil1Q8K4Q6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Neil1Q8K4Q6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Neil1Q8K4Q6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Neil1Q8K4Q6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Neil1Q8K4Q6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Neil1Q8K4Q6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Neil1Q8K4Q6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Neil1Q8K4Q6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Neil1Q8K4Q6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.55■□□□□ 0.4
Neil1Q8K4Q6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Neil1Q8K4Q6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms